RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 AnlnQ8K298 1121 aaKnown RBP15.76■□□□□ 0.11
Nup88-203ENSMUST00000108531 Mon2Q80TL7 1715 aa15.76■□□□□ 0.11
Nup88-203ENSMUST00000108531 Dennd6aQ8BH65 605 aa15.75■□□□□ 0.11
Nup88-203ENSMUST00000108531 Atp8b2P98199 1209 aa15.75■□□□□ 0.11
Nup88-203ENSMUST00000108531 Prune1Q8BIW1 454 aa15.75■□□□□ 0.11
Nup88-203ENSMUST00000108531 Foxp4Q9DBY0 795 aaKnown RBP15.75■□□□□ 0.11
Nup88-203ENSMUST00000108531 Hsp90b1P08113 802 aaKnown RBP15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 PtprvP70289 1705 aa15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 D430041D05RikF6ZGR6 1678 aa15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 Gm45015A0A140LII9 184 aa15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 Gm18336A0A140LIU8 765 aa15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 Gm9992B2RWK3 458 aa15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 Dhx16G3X8X0 1044 aaKnown RBP15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 Anapc15P60007 132 aa15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 Unc93aQ710D3 458 aa15.74■□□□□ 0.11
Nup88-203ENSMUST00000108531 Hoxa7P02830 229 aa15.73■□□□□ 0.11
Nup88-203ENSMUST00000108531 Atp6v1dP57746 247 aa15.73■□□□□ 0.11
Nup88-203ENSMUST00000108531 Noc3lQ8VI84 807 aaKnown RBP15.73■□□□□ 0.11
Nup88-203ENSMUST00000108531 Nlgn1Q99K10 843 aa15.73■□□□□ 0.11
Nup88-203ENSMUST00000108531 Erich6bQ9D4S6 220 aa15.73■□□□□ 0.11
Nup88-203ENSMUST00000108531 Myo5bP21271 1818 aa15.72■□□□□ 0.11
Nup88-203ENSMUST00000108531 Filip1lQ6P6L0 1131 aa15.72■□□□□ 0.11
Nup88-203ENSMUST00000108531 Cabp4Q8VHC5 271 aa15.72■□□□□ 0.11
Nup88-203ENSMUST00000108531 Disp3A3KFU9 1347 aa15.72■□□□□ 0.11
Nup88-203ENSMUST00000108531 Gm21190A0A0G2JGJ6 266 aa15.71■□□□□ 0.11
Nup88-203ENSMUST00000108531 Cwc27Q3TKY6 469 aa15.71■□□□□ 0.11
Nup88-203ENSMUST00000108531 Ccne1Q61457 408 aa15.71■□□□□ 0.11
Nup88-203ENSMUST00000108531 Glipr1l2Q9CQ35 332 aa15.71■□□□□ 0.11
Nup88-203ENSMUST00000108531 Mcmdc2E9Q956 681 aa15.71■□□□□ 0.1
Nup88-203ENSMUST00000108531 Atf5O70191 283 aa15.71■□□□□ 0.1
Nup88-203ENSMUST00000108531 Znf692Q3U381 531 aa15.71■□□□□ 0.1
Nup88-203ENSMUST00000108531 Clcn1Q64347 994 aa15.71■□□□□ 0.1
Nup88-203ENSMUST00000108531 Fez1Q8K0X8 392 aa15.71■□□□□ 0.1
Nup88-203ENSMUST00000108531 Ahnak2E9PYB0 1738 aaKnown RBP15.71■□□□□ 0.1
Nup88-203ENSMUST00000108531 C5P06684 1680 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Phactr2B1AVP0 632 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Smarce1O54941 411 aaKnown RBP15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Rad17Q6NXW6 688 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 St18Q80TY4 1045 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Pnpla7A2AJ88 1352 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Tpm2P58774 284 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Sox12Q04890 314 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Mum1Q6DID5 682 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 HypkQ9CR41 129 aa15.7■□□□□ 0.1
Nup88-203ENSMUST00000108531 Als2Q920R0 1651 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Syce3B5KM66 88 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Kif4P33174 1231 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Pdcl2Q78Y63 240 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Nol11Q8BJW5 723 aaKnown RBP15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 KinQ8K339 391 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Nckap5lQ6GQX2 1323 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Gadd45bP22339 160 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 EvcP57680 1005 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Chpf2Q3UU43 768 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Tshz3Q8CGV9 1081 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Arfgef2A2A5R2 1792 aa15.69■□□□□ 0.1
Nup88-203ENSMUST00000108531 Idi1P58044 227 aa15.68■□□□□ 0.1
Nup88-203ENSMUST00000108531 Tpx2A2APB8 745 aaKnown RBP15.68■□□□□ 0.1
Nup88-203ENSMUST00000108531 Hoxc9P09633 260 aa15.68■□□□□ 0.1
Nup88-203ENSMUST00000108531 Gripap1Q8VD04 806 aa15.68■□□□□ 0.1
Nup88-203ENSMUST00000108531 Ccdc7Q9D541 371 aa15.67■□□□□ 0.1
Nup88-203ENSMUST00000108531 Ush1cQ9ES64 910 aa15.67■□□□□ 0.1
Nup88-203ENSMUST00000108531 Ddx19aQ61655 478 aaKnown RBP15.67■□□□□ 0.1
Nup88-203ENSMUST00000108531 Cyp2d12Q8BVD2 504 aa15.67■□□□□ 0.1
Nup88-203ENSMUST00000108531 VgfQ0VGU4 617 aa15.66■□□□□ 0.1
Nup88-203ENSMUST00000108531 Strn4P58404 760 aa15.66■□□□□ 0.1
Nup88-203ENSMUST00000108531 Jakmip1Q8BVL9 626 aa15.66■□□□□ 0.1
Nup88-203ENSMUST00000108531 Kdm4aQ8BW72 1064 aa15.66■□□□□ 0.1
Nup88-203ENSMUST00000108531 Chmp4cQ9D7F7 232 aa15.66■□□□□ 0.1
Nup88-203ENSMUST00000108531 Pmfbp1Q9WVQ0 1022 aa15.66■□□□□ 0.1
Nup88-203ENSMUST00000108531 Utp18Q5SSI6 552 aaKnown RBP15.65■□□□□ 0.1
Nup88-203ENSMUST00000108531 Pdzrn3Q69ZS0 1063 aa15.65■□□□□ 0.1
Nup88-203ENSMUST00000108531 Unc5clQ6R653 518 aa15.65■□□□□ 0.1
Nup88-203ENSMUST00000108531 Rcan3Q9JKK0 239 aa15.65■□□□□ 0.1
Nup88-203ENSMUST00000108531 Tnnt1O88346 262 aa15.64■□□□□ 0.09
Nup88-203ENSMUST00000108531 Ms4a2P20490 235 aa15.64■□□□□ 0.09
Nup88-203ENSMUST00000108531 Ints3Q7TPD0 1041 aaKnown RBP15.64■□□□□ 0.09
Nup88-203ENSMUST00000108531 Adamtsl3G3UXC7 1706 aa15.64■□□□□ 0.09
Nup88-203ENSMUST00000108531 Ier5O89113 308 aa15.63■□□□□ 0.09
Nup88-203ENSMUST00000108531 DmtnQ9WV69 405 aa15.63■□□□□ 0.09
Nup88-203ENSMUST00000108531 Becn1O88597 448 aa15.63■□□□□ 0.09
Nup88-203ENSMUST00000108531 Cyp2d11P24457 504 aa15.63■□□□□ 0.09
Nup88-203ENSMUST00000108531 Cpa2Q504N0 417 aa15.63■□□□□ 0.09
Nup88-203ENSMUST00000108531 Gsdma3Q5Y4Y6 464 aa15.63■□□□□ 0.09
Nup88-203ENSMUST00000108531 Rad50P70388 1312 aa15.62■□□□□ 0.09
Nup88-203ENSMUST00000108531 Cnksr1A2A9K7 700 aa15.62■□□□□ 0.09
Nup88-203ENSMUST00000108531 Zscan25B2RX31 543 aa15.62■□□□□ 0.09
Nup88-203ENSMUST00000108531 Rbm27Q5SFM8 1060 aaKnown RBP15.62■□□□□ 0.09
Nup88-203ENSMUST00000108531 CoilQ5SU73 570 aa15.62■□□□□ 0.09
Nup88-203ENSMUST00000108531 Rnf214Q8BFU3 668 aaKnown RBP15.62■□□□□ 0.09
Nup88-203ENSMUST00000108531 Gm10563F6WIE4 79 aa15.61■□□□□ 0.09
Nup88-203ENSMUST00000108531 Cct4P80315 539 aaKnown RBP15.61■□□□□ 0.09
Nup88-203ENSMUST00000108531 Slx4ipQ9D7Y9 413 aa15.61■□□□□ 0.09
Nup88-203ENSMUST00000108531 Scaf1Q5U4C3 1256 aaKnown RBP15.6■□□□□ 0.09
Nup88-203ENSMUST00000108531 Mlh1Q9JK91 760 aa15.6■□□□□ 0.09
Nup88-203ENSMUST00000108531 Nup153E9Q3G8 1462 aaKnown RBP15.6■□□□□ 0.09
Nup88-203ENSMUST00000108531 Elmsan1E9Q2I4 1089 aaKnown RBP15.6■□□□□ 0.09
Nup88-203ENSMUST00000108531 Ano8Q6PB70 1060 aa15.6■□□□□ 0.09
Nup88-203ENSMUST00000108531 Atg3Q9CPX6 314 aa15.6■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms