RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Map4k4P97820 1233 aaKnown RBP16.13■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Ccdc155Q80VJ8 648 aa16.13■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Col23a1Q8K4G2 532 aa16.13■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Sumf1Q8R0F3 372 aa16.12■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 MetP16056 1379 aa16.12■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Togaram1Q6A070 1776 aaKnown RBP16.11■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 DiexfQ8BTT6 772 aaKnown RBP16.11■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Efcab2Q9CQ46 164 aa16.11■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Cers3Q1A3B0 383 aa16.1■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Smg7Q5RJH6 1138 aaKnown RBP16.1■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Miga2Q8BK03 593 aa16.1■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Ncbp3Q8BZR9 615 aaKnown RBP16.1■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Dpf1Q9QX66 387 aa16.1■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Apaf1O88879 1249 aa16.09■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Ubxn2bQ0KL01 331 aa16.09■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Igf2rQ07113 2483 aaKnown RBP16.09■□□□□ 0.17
Ccdc28a-202ENSMUST00000080860 Cavin4A2AMM0 362 aa16.08■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Lrrc43Q3V0L5 667 aa16.08■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 StrcQ8VIM6 1809 aa16.08■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Rtf1A2AQ19 715 aaKnown RBP16.07■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Tcerg1Q8CGF7 1100 aaKnown RBP16.07■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 PigbQ9JJQ0 542 aa16.07■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Ddx60E9PZQ1 1711 aa16.06■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Wwc2Q6NXJ0 1187 aa16.06■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Exoc6Q8R313 802 aa16.06■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 RtcbQ99LF4 505 aaKnown RBP16.06■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Col4a1P02463 1669 aa16.05■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Col1a2Q01149 1372 aa16.05■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Mapk8ip3Q9ESN9 1337 aa16.05■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Iqsec3Q3TES0 1195 aa16.05■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Btbd11Q6GQW0 1109 aa16.05■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Sgip1Q8VD37 806 aa16.05■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Syde2E9PUP1 1314 aa16.04■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Zscan21Q07231 555 aa16.04■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Uspl1Q3ULM6 1089 aa16.04■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Phf23Q8BSN5 401 aa16.04■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Amhr2Q8K592 568 aa16.04■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Znrd1-asQ8R0E5 213 aa16.04■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Rad23bP54728 416 aa16.03■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 HmcesQ8R1M0 353 aaKnown RBP16.03■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Mrps5Q99N87 432 aaKnown RBP16.03■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Prim1P20664 417 aa16.02■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Zbtb1Q91VL9 713 aa16.02■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Pdia6Q922R8 440 aaKnown RBP16.02■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Foxp4Q9DBY0 795 aaKnown RBP16.02■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Itgb4A2A863 1818 aa16.02■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Lama4P97927 1816 aa16.02■□□□□ 0.16
Ccdc28a-202ENSMUST00000080860 Dlg5E9Q9R9 1921 aa16.02■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Prr29B1ARI9 187 aa16.01■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Eif4a1P60843 406 aaKnown RBP16.01■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Msl1Q6PDM1 616 aa16.01■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 CpzQ8R4V4 654 aa16.01■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Golga2Q921M4 999 aa16.01■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Swt1Q9DBQ9 907 aa16.01■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 ScaperF8VQ70 1398 aaKnown RBP16■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Casz1Q9CWL2 1761 aa16■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Ambra1A2AH22 1300 aa16■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Ubn2Q80WC1 1314 aa16■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Hirip3Q8BLH7 601 aa16■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Golgb1E9PVZ8 3238 aa15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Wdr66E9Q743 1299 aa15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Magea6O89010 325 aa15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Dusp27Q148W8 1138 aa15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 1810065E05RikQ5NC41 235 aa15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Magea3Q6T340 320 aa15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Gigyf1Q99MR1 1044 aaKnown RBP15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Sipa1l3G3X9J0 1776 aa15.99■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 BcorQ8CGN4 1759 aa15.98■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Gm12185Q5NCB2 835 aa15.98■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Erbb4Q61527 1308 aa15.97■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Esx1O88933 382 aa15.97■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Tlr8P58682 1032 aa15.97■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Slfnl1Q8BHW9 410 aa15.97■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Cyp2d12Q8BVD2 504 aa15.97■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Prr5lA2AVJ5 370 aa15.96■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Tgfb2P27090 414 aa15.96■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Atp1b3P97370 278 aa15.96■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Clcn1Q64347 994 aa15.96■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Camkk2Q8C078 588 aa15.96■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Flad1Q8R123 492 aa15.96■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Trip6Q9Z1Y4 480 aa15.96■□□□□ 0.15
Ccdc28a-202ENSMUST00000080860 Ggnbp2Q5SV77 696 aa15.95■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Tmem119Q8R138 280 aa15.95■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Nip7Q9CXK8 180 aaKnown RBP15.95■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Frmpd3A0A140LIW3 1774 aa15.95■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Cfap70D3YVL2 1141 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Snai1Q02085 264 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Morc2aQ69ZX6 1030 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Egfem1Q8C088 590 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 TefQ9JLC6 301 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Usp21Q9QZL6 566 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Taf7Q9R1C0 341 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Col4a5Q63ZW6 1691 aa15.94■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Duox1A2AQ92 1551 aa15.93■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Mrc1Q61830 1456 aa15.93■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Atf5O70191 283 aa15.93■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Srp68Q8BMA6 625 aaKnown RBP15.93■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 SowahdQ8BY98 327 aa15.93■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 GckrQ91X44 587 aa15.93■□□□□ 0.14
Ccdc28a-202ENSMUST00000080860 Col5a2Q3U962 1497 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms