RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Atg4a-psA0A0G2JFS9 396 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Hoxb7P09024 217 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Atg4aQ8C9S8 396 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Pdlim2Q8R1G6 349 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Rcan3Q9JKK0 239 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Gm10471E9Q1C7 252 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 ImpactO55091 318 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 AppP12023 770 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Mcm3P25206 812 aaKnown RBP11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 EappQ5BU09 281 aa11.71□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Ncbp3Q8BZR9 615 aaKnown RBP11.71□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Chmp3Q9CQ10 224 aa11.71□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Cyp27a1Q9DBG1 533 aa11.71□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Zkscan16A2ALW2 728 aa11.71□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Nap1l3Q794H2 544 aa11.71□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Kiaa0754Q69ZZ9 979 aa11.71□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Amotl2Q8K371 772 aa11.71□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 DmtnQ9WV69 405 aa11.71□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Gsdma3Q5Y4Y6 464 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Kdm4cQ8VCD7 1054 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Brf1Q8CFK2 676 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Trim30aP15533 496 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Zbtb45Q52KG4 520 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 RestQ8VIG1 1082 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Nlgn1Q99K10 843 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Slx4ipQ9D7Y9 413 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 PtprmP28828 1452 aa11.7□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Evi5lH3BKQ3 813 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Zap70P43404 618 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Tpm2P58774 284 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Gjb2Q00977 226 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Pank2Q3U4S0 443 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Sh3bgrQ9WUZ7 214 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Plekhg1F6S200 1446 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Kiaa0556Q8C753 1610 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Cnnm3Q32NY4 713 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Tceanc2Q8R2M0 207 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Bicd2Q921C5 820 aa11.69□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 IghaA0A0A6YXW6 389 aa11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Q9D9S1 216 aa11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Adgrl1Q80TR1 1466 aa11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Nrxn1Q9CS84 1514 aa11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Cavin2Q63918 418 aaKnown RBP11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Fmnl2A2APV2 1086 aa11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Top1mtQ8R4U6 593 aa11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Chd1lQ9CXF7 900 aa11.68□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Tnnt2P50752 301 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Jarid2Q62315 1234 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Ddx11Q6AXC6 880 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Clstn1Q9EPL2 979 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Ino80Q6ZPV2 1559 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Ppfia3P60469 1194 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Astn2Q80Z10 1352 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Naa30Q8CES0 364 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Pde3bQ61409 1100 aa11.67□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Fbxo2Q80UW2 297 aa11.66□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Slc35g1Q8BY79 368 aa11.66□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Tpd52l1O54818 204 aa11.66□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Nol8Q3UHX0 1147 aaKnown RBP11.66□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Btbd11Q6GQW0 1109 aa11.66□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Kif24Q6NWW5 1356 aa11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 PzpQ61838 1495 aa11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Ccdc155Q80VJ8 648 aa11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 LlphQ9D945 130 aaKnown RBP11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Tpx2A2APB8 745 aaKnown RBP11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Dhx16G3X8X0 1044 aaKnown RBP11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Tm6sf1P58749 370 aa11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 GnpatP98192 678 aa11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Q8C5K5 320 aa11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Aldh1l2Q8K009 923 aa11.65□□□□□ -0.54
Pcdh1-201ENSMUST00000057185 Qser1A2BIE1 1698 aa11.65□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 CltcQ68FD5 1675 aaKnown RBP11.65□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gm973E9Q295 1059 aa11.65□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Hoxc9P09633 260 aa11.65□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Zranb3Q6NZP1 1069 aa11.65□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Il1rapl2Q9ERS6 686 aa11.65□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Pa2g4P50580 394 aaKnown RBP11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Bms1Q6PGF5 1284 aaKnown RBP11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Mrps27Q8BK72 415 aaKnown RBP11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Chmp7Q8R1T1 451 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Ccer1Q9CQL2 403 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Ddit3P35639 168 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Dixdc1Q80Y83 711 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Serpina10Q8R121 448 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Mlh1Q9JK91 760 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 RdxP26043 583 aaKnown RBP11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Chl1P70232 1209 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Bach1P97302 739 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Atp8b2P98199 1209 aa11.64□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 FancaQ9JL70 1439 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Elp1Q7TT37 1333 aaKnown RBP11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Mical1Q8VDP3 1048 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Uhrf1bp1B2KF50 1429 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Ccdc173A0JLY1 547 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 MarsQ68FL6 902 aaKnown RBP11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Nol11Q8BJW5 723 aaKnown RBP11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 R3hcc1Q8BSI6 488 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Fam13bQ8K2H3 851 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Kcnn1Q9EQR3 537 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Ccdc66Q6NS45 935 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 696.9 ms