RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ccar1Q8CH18 1146 aaKnown RBP8.72□□□□□ -1.01
Bdnf-201ENSMUST00000053317 DnmbpQ6TXD4 1580 aa8.72□□□□□ -1.01
Bdnf-201ENSMUST00000053317 Camta1A2A891 1682 aa8.72□□□□□ -1.01
Bdnf-201ENSMUST00000053317 Ralbp1Q62172 648 aa8.71□□□□□ -1.01
Bdnf-201ENSMUST00000053317 Pde4dQ01063 747 aa8.71□□□□□ -1.01
Bdnf-201ENSMUST00000053317 PsapQ61207 557 aaKnown RBP8.71□□□□□ -1.01
Bdnf-201ENSMUST00000053317 Kcnh4A2A5F7 1018 aa8.71□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Mphosph10Q810V0 681 aaKnown RBP8.71□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Slfnl1Q8BHW9 410 aa8.71□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Kdm6aO70546 1401 aa8.71□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Nol10Q5RJG1 687 aaKnown RBP8.71□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Vsig10D3YX43 558 aa8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Ifit1bl2Q3U687 466 aa8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 VeztQ3ZK22 780 aa8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Trim34aQ99PP6 485 aa8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Zfp444Q3TDV8 331 aaKnown RBP8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 GckrQ91X44 587 aa8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Gas2l2Q5SSG4 860 aa8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Ttc19Q8CC21 365 aa8.7□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Arap3Q8R5G7 1538 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Nlrp3Q8R4B8 1033 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Akt1s1Q9D1F4 257 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Rgs17Q9QZB0 210 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Tnrc6bQ8BKI2 1810 aaKnown RBP8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Prdm2A2A7B5 1709 aaKnown RBP8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Vps33bP59016 617 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Gprasp1Q5U4C1 1347 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Fam135bQ9DAI6 1403 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Tlr8P58682 1032 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Atg3Q9CPX6 314 aa8.69□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Wdhd1P59328 1117 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Zbtb1Q91VL9 713 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Gm13023A2A8N2 498 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 MeiocA2AG06 965 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Kif23E9Q5G3 953 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Uspl1Q3ULM6 1089 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Zcwpw1Q6IR42 630 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Ric3Q8BPM6 367 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Dctn1O08788 1281 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Hspa2P17156 633 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Gtf3c3Q3TMP1 882 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 TrhQ62361 256 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Gnl3lQ6PGG6 577 aaKnown RBP8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Srp68Q8BMA6 625 aaKnown RBP8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Ints5Q8CHT3 1018 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Kiaa1107Q80TK0 1369 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Chd4Q6PDQ2 1915 aaKnown RBP8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Fam83gQ5SWY7 812 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Rad17Q6NXW6 688 aa8.68□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Col16a1Q8BLX7 1580 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Map4k4P97820 1233 aaKnown RBP8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Kiaa0319lQ8K135 1048 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Sumf1Q8R0F3 372 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 AppP12023 770 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Q4VA45 678 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Sos1Q62245 1319 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Jarid2Q62315 1234 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Afg3l2Q8JZQ2 802 aaKnown RBP8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 C5P06684 1680 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Simc1E9Q6E9 1354 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Upf2A2AT37 1269 aaKnown RBP8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Slc4a10Q5DTL9 1118 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 GptQ8QZR5 496 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Rps6ka4Q9Z2B9 773 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 D430041D05RikF6ZGR6 1678 aa8.67□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Rwdd1Q9CQK7 243 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Tktl2Q9D4D4 627 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Slit2Q9R1B9 1521 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Erbb3Q61526 1339 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 NppbP40753 121 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Ubxn2bQ0KL01 331 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Fam198bQ3UPI1 517 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Lrrc43Q3V0L5 667 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 EappQ5BU09 281 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Trim44Q9QXA7 346 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Parp14Q2EMV9 1817 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 4930523C07RikE9Q2T4 99 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Atp1b3P97370 278 aa8.66□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Eif4g2Q62448 906 aaKnown RBP8.65□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Cluap1Q8R3P7 413 aa8.65□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Nkx2-3P97334 362 aa8.65□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Gm12185Q5NCB2 835 aa8.65□□□□□ -1.02
Bdnf-201ENSMUST00000053317 Esco1Q69Z69 843 aa8.65□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Egfem1Q8C088 590 aa8.65□□□□□ -1.03
Bdnf-201ENSMUST00000053317 HmcesQ8R1M0 353 aaKnown RBP8.65□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Taf7Q9R1C0 341 aa8.65□□□□□ -1.03
Bdnf-201ENSMUST00000053317 SympkQ80X82 1284 aa8.64□□□□□ -1.03
Bdnf-201ENSMUST00000053317 AceP09470 1312 aa8.64□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Pik3c2aQ61194 1686 aa8.64□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Zc3h12cQ5DTV4 884 aa8.64□□□□□ -1.03
Bdnf-201ENSMUST00000053317 B4galnt4Q766D5 1034 aa8.64□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Nfat5Q9WV30 1534 aa8.64□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Ttll7A4Q9F0 912 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Spryd3E9Q9B3 442 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Slurp2P0DP59 97 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Fkbp5Q64378 456 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Kif1aP33173 1695 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Ccdc6D3YZP9 469 aa8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Eif4a1P60843 406 aaKnown RBP8.63□□□□□ -1.03
Bdnf-201ENSMUST00000053317 Ell2Q3UKU1 639 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 91.3 ms