RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 CatipB9EKE5 520 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Chl1P70232 1209 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Bms1Q6PGF5 1284 aaKnown RBP12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Nrxn1Q9CS84 1514 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Nap1l3Q794H2 544 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Safb2Q80YR5 991 aaKnown RBP12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Cep170bQ80U49 1574 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Tpd52l1O54818 204 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Kif3aP28741 701 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Iffo2Q8R2V2 512 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Kiaa0556Q8C753 1610 aa12.42□□□□□ -0.42
Trim17-201ENSMUST00000047697 Vwa3bJ9JI28 736 aa12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Pdzrn3Q69ZS0 1063 aa12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Adgrl1Q80TR1 1466 aa12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Fndc1E9Q043 1732 aa12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Tpx2A2APB8 745 aaKnown RBP12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Bach1P97302 739 aa12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Mknk2Q8CDB0 459 aa12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Chd1P40201 1711 aa12.41□□□□□ -0.42
Trim17-201ENSMUST00000047697 Trpm1Q2TV84 1622 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Exoc6bA6H5Z3 810 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Fam184aE9PW83 1143 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 EzrP26040 586 aaKnown RBP12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 RdxP26043 583 aaKnown RBP12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Cnnm3Q32NY4 713 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Adam1bQ8R534 806 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Cspp1B2RX88 1205 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Hvcn1Q3U2S8 269 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Mum1Q6DID5 682 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Stx6Q9JKK1 255 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Ehbp1l1Q99MS7 1716 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Arhgap23Q69ZH9 1483 aa12.4□□□□□ -0.42
Trim17-201ENSMUST00000047697 Strn4P58404 760 aa12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 Cbx1P83917 185 aaKnown RBP12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 Chpf2Q3UU43 768 aa12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 Mphosph10Q810V0 681 aaKnown RBP12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ccdc178Q8CDV0 866 aa12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 Brf1Q8CFK2 676 aa12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 Q9D9S1 216 aa12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 Mlh1Q9JK91 760 aa12.4□□□□□ -0.43
Trim17-201ENSMUST00000047697 PtprtQ99M80 1454 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Fmnl2A2APV2 1086 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ccne1Q61457 408 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Rassf8Q8CJ96 419 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ddx19aQ61655 478 aaKnown RBP12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Chrna2Q91X60 512 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Sh3bgrQ9WUZ7 214 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Tmem131lQ3U3D7 1597 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Wdr78E9PYY5 807 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Mmp8O70138 465 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Fkbp4P30416 458 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Top1mtQ8R4U6 593 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 Mmel1Q9JLI3 765 aa12.39□□□□□ -0.43
Trim17-201ENSMUST00000047697 FosbP13346 338 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Anapc15P60007 132 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Atp8b2P98199 1209 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Anp32cQ64G17 123 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Dixdc1Q80Y83 711 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Pmfbp1Q9WVQ0 1022 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Med4Q9CQA5 270 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Bicd2Q921C5 820 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Sh3bp5Q9Z131 463 aa12.38□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ubap1lG3UW59 384 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Tceanc2Q8R2M0 207 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ccdc66Q6NS45 935 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Snx13Q6PHS6 957 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Dennd6aQ8BH65 605 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Rsph4aQ8BYM7 716 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Nup88Q8CEC0 753 aaKnown RBP12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Gys2Q8VCB3 704 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 HypkQ9CR41 129 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 NpatQ8BMA5 1420 aa12.37□□□□□ -0.43
Trim17-201ENSMUST00000047697 Mcmdc2E9Q956 681 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Cfap73J3QPZ5 306 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ube2hP62257 183 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Bach2P97303 839 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ap3b2Q9JME5 1082 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Utp18Q5SSI6 552 aaKnown RBP12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Abca9Q8K449 1623 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Zfp91Q62511 572 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Depdc5P61460 1591 aa12.36□□□□□ -0.43
Trim17-201ENSMUST00000047697 Hoxb7P09024 217 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Zap70P43404 618 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Cchcr1Q8K2I2 770 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 PdcQ9QW08 244 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Hecw2Q6I6G8 1578 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 CebpzP53569 1052 aaKnown RBP12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Zbtb45Q52KG4 520 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ddx11Q6AXC6 880 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Frmd3Q8BHD4 595 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ccar2Q8VDP4 922 aaKnown RBP12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Pes1Q9EQ61 584 aaKnown RBP12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Knl1Q66JQ7 1612 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Pnma3Q8JZW8 466 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 Yeats2Q3TUF7 1407 aa12.35□□□□□ -0.43
Trim17-201ENSMUST00000047697 NaspQ99MD9 773 aaKnown RBP12.34□□□□□ -0.43
Trim17-201ENSMUST00000047697 Eya1P97767 591 aa12.34□□□□□ -0.43
Trim17-201ENSMUST00000047697 Pde3bQ61409 1100 aa12.34□□□□□ -0.43
Trim17-201ENSMUST00000047697 Ptgs1P22437 602 aa12.33□□□□□ -0.44
Trim17-201ENSMUST00000047697 TnmdQ9EP64 317 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms