RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Erich4Q3UNU4 136 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Fkbp5Q64378 456 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Anapc15-psA0A140T8L6 141 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Pdia4P08003 638 aaKnown RBP19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Kdm3aQ6PCM1 1323 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Pcf11G3X9Z4 1553 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Il16O54824 1322 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ppip5k2Q6ZQB6 1129 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ppip5k1A2ARP1 1436 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Pik3r4Q8VD65 1358 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Rnf41Q8BH75 317 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Tmx4Q8C0L0 335 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Fam135aQ6NS59 1506 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ptpdc1Q6NZK8 747 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Frmd3Q8BHD4 595 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Rcan3Q9JKK0 239 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Mctp2Q5RJH2 878 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Dennd6aQ8BH65 605 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Zeb2Q9R0G7 1215 aa19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Tax1bp1Q3UKC1 814 aaKnown RBP19.17■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Fermt1P59113 677 aa19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ddx10Q80Y44 875 aaKnown RBP19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Golim4Q8BXA1 655 aa19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 4930572O03RikQ8C5Y0 211 aa19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Map4k4P97820 1233 aaKnown RBP19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Gm1043A0A140LJC2 1431 aa19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Cfap69Q8BH53 942 aa19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Aldh1l1Q8R0Y6 902 aa19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Zmym4A2A791 1549 aaKnown RBP19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 DroshaQ5HZJ0 1373 aaKnown RBP19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Rad23bP54728 416 aa19.16■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Txndc16Q7TN22 820 aa19.15■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Map7d1A2AJI0 846 aa19.15■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Zfp42P22227 288 aa19.15■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Noc2lQ9WV70 747 aaKnown RBP19.15■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ampd3O08739 766 aa19.15■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Api5O35841 504 aaKnown RBP19.14■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Btbd11Q6GQW0 1109 aa19.14■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ccdc158Q8CDI6 1109 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Galntl5Q9D4M9 431 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Fkbp4P30416 458 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 MpripP97434 1024 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Themis2Q91YX0 663 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Arap1Q4LDD4 1452 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 NexmifQ5DTT1 1515 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Sdccag8Q80UF4 717 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Cabp2Q9JLK4 216 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Apol7aB2RT54 418 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Diaph1O08808 1255 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Gigyf2Q6Y7W8 1291 aaKnown RBP19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Hmg20bQ9Z104 317 aa19.14■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Gm21698A0A087WQP8 267 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 IqcgQ80W32 419 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Iffo1Q8BXL9 562 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Ube2hP62257 183 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Rfx7F8VPJ6 1459 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Nphp3Q7TNH6 1325 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Nucb2P81117 420 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Sytl4Q9R0Q1 673 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Dnajc2P54103 621 aaKnown RBP19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Sass6Q80UK7 654 aa19.13■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Gse1Q3U3C9 1213 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Q9D9H8 365 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Kiaa1524Q8BWY9 907 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Krt23Q99PS0 422 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 AqrQ8CFQ3 1481 aaKnown RBP19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Rapgef6Q5NCJ1 1609 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Mroh2bQ7M6Y6 1581 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Brf1Q8CFK2 676 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Smarcc1P97496 1104 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Snw1Q9CSN1 536 aaKnown RBP19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Paip2Q9D6V8 124 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Ttc19Q8CC21 365 aa19.12■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Slc4a2P13808 1237 aaKnown RBP19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Hsf2bpQ9D4G2 338 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Sh3d21Q7TSG5 549 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Tmco5aQ9D9D5 303 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Uchl5Q9WUP7 329 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Rasal2E9PW37 1286 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Eif4g1Q6NZJ6 1600 aaKnown RBP19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Slc7a3P70423 618 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Pde4bB1AWC9 736 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Apaf1O88879 1249 aa19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Brd3Q8K2F0 726 aaKnown RBP19.11■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Slc52a2Q9D8F3 450 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Cdan1Q8CC12 1239 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Ctnna2Q61301 953 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Ccdc42Q5SV66 316 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Tubb5P99024 444 aaKnown RBP19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Stk11ipQ3TAA7 1072 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Lrsam1Q80ZI6 727 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Limch1Q3UH68 1057 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 SfpqQ8VIJ6 699 aaKnown RBP19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 PaskQ8CEE6 1383 aa19.1■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 NapbP28663 298 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Pof1bQ8K4L4 587 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Cul5Q9D5V5 780 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Eif3bQ8JZQ9 803 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Tmc2Q8R4P4 888 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Ces1hD3Z298 562 aa19.09■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms