RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Anapc15P60007 132 aa16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zranb1Q7M760 708 aa16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Prune1Q8BIW1 454 aa16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Brpf3B2KF05 1204 aaKnown RBP16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Hmox1P14901 289 aa16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Cavin2Q63918 418 aaKnown RBP16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Rab3gap1Q80UJ7 981 aa16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zmynd15Q8C0R7 736 aa16.04■□□□□ 0.16
Vps35-201ENSMUST00000034131 Polr3gQ6NXY9 223 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Ap3b2Q9JME5 1082 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Ints3Q7TPD0 1041 aaKnown RBP16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Prdm4Q80V63 803 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Irx2P81066 474 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 EappQ5BU09 281 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Ppp1r18Q8BQ30 594 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Stx6Q9JKK1 255 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Trpm1Q2TV84 1622 aa16.03■□□□□ 0.16
Vps35-201ENSMUST00000034131 Otud6bQ8K2H2 294 aa16.02■□□□□ 0.16
Vps35-201ENSMUST00000034131 RestQ8VIG1 1082 aa16.02■□□□□ 0.16
Vps35-201ENSMUST00000034131 Smc3Q9CW03 1217 aaKnown RBP16.02■□□□□ 0.16
Vps35-201ENSMUST00000034131 Hecw2Q6I6G8 1578 aa16.02■□□□□ 0.16
Vps35-201ENSMUST00000034131 Abca8bQ8K440 1620 aa16.02■□□□□ 0.16
Vps35-201ENSMUST00000034131 Sox12Q04890 314 aa16.02■□□□□ 0.15
Vps35-201ENSMUST00000034131 Stk26Q99JT2 416 aa16.02■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ifi35Q9D8C4 286 aa16.02■□□□□ 0.15
Vps35-201ENSMUST00000034131 Zscan29E9Q5B4 869 aa16.01■□□□□ 0.15
Vps35-201ENSMUST00000034131 Utp18Q5SSI6 552 aaKnown RBP16.01■□□□□ 0.15
Vps35-201ENSMUST00000034131 Nup88Q8CEC0 753 aaKnown RBP16.01■□□□□ 0.15
Vps35-201ENSMUST00000034131 Hmgn5Q9JL35 406 aa16.01■□□□□ 0.15
Vps35-201ENSMUST00000034131 Fmnl2A2APV2 1086 aa16.01■□□□□ 0.15
Vps35-201ENSMUST00000034131 MarsQ68FL6 902 aaKnown RBP16.01■□□□□ 0.15
Vps35-201ENSMUST00000034131 Pdzrn3Q69ZS0 1063 aa16.01■□□□□ 0.15
Vps35-201ENSMUST00000034131 CgnP59242 1191 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Nlrp3Q8R4B8 1033 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Slx4ipQ9D7Y9 413 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Mad1l1Q9WTX8 717 aaKnown RBP16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ptpdc1Q6NZK8 747 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Atp10dQ8K2X1 1416 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Rims1Q99NE5 1463 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Abca9Q8K449 1623 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Aifm3Q3TY86 605 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 Tomm22Q9CPQ3 142 aa16■□□□□ 0.15
Vps35-201ENSMUST00000034131 ShprhQ7TPQ3 1674 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Rnf123Q5XPI3 1314 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Elmsan1E9Q2I4 1089 aaKnown RBP15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Skint5A7XUY5 1461 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 NmiO35309 314 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Kif2aP28740 705 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Cep135Q6P5D4 1140 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Pof1bQ8K4L4 587 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Add3Q9QYB5 706 aaKnown RBP15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ess2O70279 479 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Usp48Q3V0C5 1052 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Mkrn3Q60764 544 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ift57Q8BXG3 429 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Wdr24Q8CFJ9 790 aa15.99■□□□□ 0.15
Vps35-201ENSMUST00000034131 Nrbp1Q99J45 535 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 AatfQ9JKX4 526 aaKnown RBP15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Znf326O88291 580 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Zpr1Q62384 459 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ano6Q6P9J9 911 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Plin1Q8CGN5 517 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Klhdc4Q921I2 584 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Pmfbp1Q9WVQ0 1022 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Serpinb6bO08804 377 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ms4a1P19437 291 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 Atp1b4Q99ME6 356 aa15.98■□□□□ 0.15
Vps35-201ENSMUST00000034131 PalldQ9ET54 1408 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Atp7bQ64446 1462 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Klhl34A2AI76 644 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Zfp597E9Q6S0 419 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Birc3O08863 600 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Tshz1Q5DTH5 1084 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ccdc7Q9D541 371 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Efcab6Q6P1E8 1516 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Rnf17Q99MV7 1640 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Cdk4P30285 303 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Uggt1Q6P5E4 1551 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Eif2ak4Q9QZ05 1648 aa15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 Wdr33Q8K4P0 1330 aaKnown RBP15.97■□□□□ 0.15
Vps35-201ENSMUST00000034131 RbsnQ80Y56 783 aa15.96■□□□□ 0.15
Vps35-201ENSMUST00000034131 Ulbp1Q8HWA3 334 aa15.96■□□□□ 0.15
Vps35-201ENSMUST00000034131 Cabp2Q9JLK4 216 aa15.96■□□□□ 0.15
Vps35-201ENSMUST00000034131 Sos1Q62245 1319 aa15.96■□□□□ 0.15
Vps35-201ENSMUST00000034131 Kif24Q6NWW5 1356 aa15.96■□□□□ 0.15
Vps35-201ENSMUST00000034131 Nap1l3Q794H2 544 aa15.96■□□□□ 0.14
Vps35-201ENSMUST00000034131 Tyro3P55144 880 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Tpm1P58771 284 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Ptch1Q61115 1434 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Brpf1B2RRD7 1212 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Capn2O08529 700 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Trap1aP19473 224 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Nol8Q3UHX0 1147 aaKnown RBP15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Nphp1Q9QY53 687 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Nfe2l3Q9WTM4 660 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Dnajc2P54103 621 aaKnown RBP15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Ccz1Q8C1Y8 480 aa15.95■□□□□ 0.14
Vps35-201ENSMUST00000034131 Plxnc1Q9QZC2 1574 aa15.94■□□□□ 0.14
Vps35-201ENSMUST00000034131 TnmdQ9EP64 317 aa15.94■□□□□ 0.14
Vps35-201ENSMUST00000034131 Cdc42bpbQ7TT50 1713 aa15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms