Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 FEM1AP3-201ENST00000403722 1741 ntBASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 MIR718-201ENST00000390190 70 ntBASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 FAM197Y1-201ENST00000421178 764 ntBASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 CD177P1-201ENST00000606252 935 ntBASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DRB4X5D2U9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.15□□□□□ -0.15
HLA-DRB4X5D2U9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 AC005332.8-201ENST00000622750 2735 ntBASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 FZD10-202ENST00000539839 3282 ntBASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 AC007613.1-201ENST00000572811 2597 ntBASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 PRSS44-201ENST00000515154 1146 ntBASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 AC011298.2-201ENST00000617989 482 ntBASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DRB4X5D2U9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 FSCN1P1-201ENST00000568912 1481 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms