Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 POM121L3P-201ENST00000419331 1163 ntBASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 FAM215A-202ENST00000632077 792 ntBASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 ZNF815P-204ENST00000434898 1737 ntBASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCH2Q9Y6C5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 AC073314.1-201ENST00000568729 2216 ntBASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 AC098831.1-202ENST00000438821 336 ntBASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 BNIP3P18-201ENST00000593976 575 ntBASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 SDHAP1-207ENST00000440850 2000 ntBASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCH2Q9Y6C5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 KRT8P7-201ENST00000533003 1432 ntBASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 MIR5100-201ENST00000579544 119 ntBASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PTCH2Q9Y6C5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.14■□□□□ 0.98
PTCH2Q9Y6C5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 UPF3AP3-201ENST00000420996 769 ntBASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 AP001160.2-201ENST00000596071 487 ntBASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 AC116407.3-201ENST00000623905 1129 ntBASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCH2Q9Y6C5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCH2Q9Y6C5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCH2Q9Y6C5 GABARAPL3-202ENST00000624044 1851 ntBASIC21.13■□□□□ 0.97
PTCH2Q9Y6C5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.13■□□□□ 0.97
PTCH2Q9Y6C5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCH2Q9Y6C5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms