Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 AL022342.1-201ENST00000400363 863 ntBASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 AC099336.1-202ENST00000602961 463 ntBASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 AC141586.3-201ENST00000562166 1838 ntBASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 AC004263.2-201ENST00000617183 678 ntBASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 AC068587.9-201ENST00000641814 219 ntBASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 Z98044.1-201ENST00000632503 1764 ntBASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 HEIH-201ENST00000623091 1652 ntBASIC20.56■□□□□ 0.88
SCN10AQ9Y5Y9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 AC005332.3-201ENST00000589904 676 ntBASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 KRT8P50-201ENST00000562022 1438 ntBASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN10AQ9Y5Y9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 AL121912.1-201ENST00000603683 238 ntBASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 REXO1L6P-202ENST00000619970 1078 ntBASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 NSUN5P1-202ENST00000421140 1535 ntBASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 NSUN5P2-203ENST00000457352 1529 ntBASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 AC091304.2-201ENST00000564639 760 ntBASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN10AQ9Y5Y9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms