Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CLDN16Q9Y5I7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.46■□□□□ 0.38
CLDN16Q9Y5I7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN16Q9Y5I7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN16Q9Y5I7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 SEC1P-202ENST00000473944 940 ntBASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 DUX4L26-201ENST00000489078 1255 ntBASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 GCSHP2-201ENST00000560971 527 ntBASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 AC034236.2-201ENST00000606662 1610 ntBASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 AC087289.5-201ENST00000586076 3175 ntBASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 AL499627.1-201ENST00000569373 2188 ntBASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN16Q9Y5I7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 AC093503.3-201ENST00000624917 2352 ntBASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN16Q9Y5I7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 RNF165-205ENST00000588679 2904 ntBASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 RNF152P1-201ENST00000397754 604 ntBASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 AK4P3-201ENST00000418260 669 ntBASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 AC063952.2-201ENST00000498792 1227 ntBASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 KRT8P7-201ENST00000533003 1432 ntBASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN16Q9Y5I7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms