Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 AC026271.3-201ENST00000571884 352 ntBASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 AP005242.2-201ENST00000580065 1175 ntBASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA4Q9Y5G9 AC104417.2-201ENST00000562989 1793 ntBASIC18.52■□□□□ 0.55
PCDHGA4Q9Y5G9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDHGA4Q9Y5G9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA4Q9Y5G9 Z82202.1-201ENST00000623446 1880 ntBASIC18.52■□□□□ 0.55
PCDHGA4Q9Y5G9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
PCDHGA4Q9Y5G9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 MESTP1-201ENST00000404287 994 ntBASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 ECEL1P2-202ENST00000465689 757 ntBASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 EGLN1P1-201ENST00000531623 762 ntBASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 AC007613.1-201ENST00000572811 2597 ntBASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 LINC01465-201ENST00000408887 1940 ntBASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA4Q9Y5G9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGA4Q9Y5G9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms