Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHB11Q9Y5F2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB11Q9Y5F2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 FAM8A6P-201ENST00000407496 1135 ntBASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 AL031432.5-201ENST00000641059 760 ntBASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 FEM1AP3-201ENST00000403722 1741 ntBASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 FP475955.4-201ENST00000623131 1990 ntBASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB11Q9Y5F2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 IRX1P1-201ENST00000438849 1838 ntBASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 TSPY5P-201ENST00000426936 936 ntBASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 CA15P1-201ENST00000481698 905 ntBASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 AC120498.9-201ENST00000339021 3867 ntBASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB11Q9Y5F2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms