Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB3Q9Y5E6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 TEX21P-204ENST00000641479 1693 ntBASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB3Q9Y5E6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC008040.2-201ENST00000461049 708 ntBASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC091390.4-202ENST00000476426 537 ntBASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 DUX4L26-201ENST00000489078 1255 ntBASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC087388.1-201ENST00000571370 1112 ntBASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC073508.3-201ENST00000619697 1419 ntBASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB3Q9Y5E6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB3Q9Y5E6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms