Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 TSPY17P-201ENST00000450329 467 ntBASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 KRT8P3-201ENST00000519669 1449 ntBASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 AC092338.2-201ENST00000568827 1415 ntBASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB9Q9Y5E1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 IER3-202ENST00000376377 1350 ntBASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 AL353719.1-201ENST00000566847 864 ntBASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 AL512604.3-201ENST00000569583 964 ntBASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 AC010653.2-201ENST00000623505 997 ntBASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 AL121956.5-201ENST00000625261 221 ntBASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB9Q9Y5E1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 AC026396.1-201ENST00000419388 421 ntBASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 AC007663.1-201ENST00000438948 1240 ntBASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 AC140113.3-201ENST00000605663 199 ntBASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms