Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1LQ9UNN4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GTF2A1LQ9UNN4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 Z98044.1-201ENST00000632503 1764 ntBASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
GTF2A1LQ9UNN4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 PRKY-204ENST00000533551 1019 ntBASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
GTF2A1LQ9UNN4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AL512353.2-201ENST00000448759 1962 ntBASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AC005082.1-201ENST00000413042 2259 ntBASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GTF2A1LQ9UNN4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 AL031598.1-201ENST00000561511 1773 ntBASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 FEM1AP3-201ENST00000403722 1741 ntBASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GTF2A1LQ9UNN4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms