Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 FER1L4-210ENST00000615531 5998 ntBASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 AC083906.6-201ENST00000641366 219 ntBASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
MRPL35Q9NZE8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 AC019069.1-201ENST00000610008 1333 ntBASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 AL139384.1-201ENST00000612143 3047 ntBASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 OR6D1P-203ENST00000641209 4860 ntBASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL35Q9NZE8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.33□□□□□ -0.27
MRPL35Q9NZE8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
MRPL35Q9NZE8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
MRPL35Q9NZE8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms