Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.58■□□□□ 0.24
RBFOX1Q9NWB1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX1Q9NWB1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX1Q9NWB1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX1Q9NWB1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RBFOX1Q9NWB1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RBFOX1Q9NWB1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX1Q9NWB1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX1Q9NWB1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 AC090192.1-201ENST00000517740 490 ntBASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 PNMA6B-201ENST00000538162 1200 ntBASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX1Q9NWB1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 AL162741.1-201ENST00000565563 1558 ntBASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
RBFOX1Q9NWB1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms