Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 IRX1P1-201ENST00000438849 1838 ntBASIC17.83■□□□□ 0.44
EXD2Q9NVH0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EXD2Q9NVH0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 AL031598.1-201ENST00000561511 1773 ntBASIC17.82■□□□□ 0.44
EXD2Q9NVH0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.82■□□□□ 0.44
EXD2Q9NVH0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 AC093525.10-201ENST00000625130 1569 ntBASIC17.82■□□□□ 0.44
EXD2Q9NVH0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.82■□□□□ 0.44
EXD2Q9NVH0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.82■□□□□ 0.44
EXD2Q9NVH0 Z98044.1-201ENST00000632503 1764 ntBASIC17.81■□□□□ 0.44
EXD2Q9NVH0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 AP000997.3-201ENST00000623333 2250 ntBASIC17.81■□□□□ 0.44
EXD2Q9NVH0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 AC133681.1-201ENST00000465482 601 ntBASIC17.81■□□□□ 0.44
EXD2Q9NVH0 CD99P1-205ENST00000527459 561 ntBASIC17.81■□□□□ 0.44
EXD2Q9NVH0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 RN7SL471P-201ENST00000580476 299 ntBASIC17.81■□□□□ 0.44
EXD2Q9NVH0 AC006058.3-201ENST00000606217 1069 ntBASIC17.81■□□□□ 0.44
EXD2Q9NVH0 AC110285.5-201ENST00000611501 352 ntBASIC17.81■□□□□ 0.44
EXD2Q9NVH0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXD2Q9NVH0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXD2Q9NVH0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms