Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.46■□□□□ 0.39
POLE3Q9NRF9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLE3Q9NRF9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLE3Q9NRF9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLE3Q9NRF9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.46■□□□□ 0.39
POLE3Q9NRF9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
POLE3Q9NRF9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 HEIH-201ENST00000623091 1652 ntBASIC17.45■□□□□ 0.38
POLE3Q9NRF9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 KRT8P32-201ENST00000512863 1461 ntBASIC17.45■□□□□ 0.38
POLE3Q9NRF9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 FAM197Y1-201ENST00000421178 764 ntBASIC17.45■□□□□ 0.38
POLE3Q9NRF9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 AC068587.9-201ENST00000641814 219 ntBASIC17.45■□□□□ 0.38
POLE3Q9NRF9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.45■□□□□ 0.38
POLE3Q9NRF9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 RPS2P55-201ENST00000397318 883 ntBASIC17.44■□□□□ 0.38
POLE3Q9NRF9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AL158047.1-201ENST00000445918 881 ntBASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AC008040.2-201ENST00000461049 708 ntBASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AC107956.1-201ENST00000494359 873 ntBASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AC116562.2-201ENST00000507042 360 ntBASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLE3Q9NRF9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 MESTP1-201ENST00000404287 994 ntBASIC17.43■□□□□ 0.38
POLE3Q9NRF9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 NUDT16P1-203ENST00000513809 620 ntBASIC17.43■□□□□ 0.38
POLE3Q9NRF9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 AC233702.5-201ENST00000584107 538 ntBASIC17.43■□□□□ 0.38
POLE3Q9NRF9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 ANO7L1-203ENST00000602586 1720 ntBASIC17.43■□□□□ 0.38
POLE3Q9NRF9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
POLE3Q9NRF9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.42■□□□□ 0.38
POLE3Q9NRF9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLE3Q9NRF9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLE3Q9NRF9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLE3Q9NRF9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLE3Q9NRF9 AC096733.2-201ENST00000609937 1394 ntBASIC17.42■□□□□ 0.38
POLE3Q9NRF9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
POLE3Q9NRF9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLE3Q9NRF9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms