Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 AC068587.9-201ENST00000641814 219 ntBASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 HTR7P1-201ENST00000538670 1336 ntBASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.93■□□□□ 0.3
NRIP3Q9NQ35 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 KSR1P1-201ENST00000446298 240 ntBASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 KRT8P3-201ENST00000519669 1449 ntBASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 AC005332.8-201ENST00000622750 2735 ntBASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NRIP3Q9NQ35 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 MTMR9LP-203ENST00000426597 1545 ntBASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 AC091390.4-202ENST00000476426 537 ntBASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 RPS2P4-201ENST00000476944 856 ntBASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 AP002982.1-201ENST00000492365 877 ntBASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 KRT8P32-201ENST00000512863 1461 ntBASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NRIP3Q9NQ35 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms