Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC091390.4-202ENST00000476426 537 ntBASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 MIR4497-201ENST00000583208 89 ntBASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 AF186192.3-201ENST00000583427 947 ntBASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 AL135905.2-201ENST00000584934 1404 ntBASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 AC009113.1-201ENST00000570267 2443 ntBASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEUROD4Q9HD90 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 AC011298.2-201ENST00000617989 482 ntBASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 CR392000.1-201ENST00000624770 1228 ntBASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NEUROD4Q9HD90 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 AC005082.1-201ENST00000413042 2259 ntBASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 KRT8P32-201ENST00000512863 1461 ntBASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 AC079598.2-202ENST00000546624 1451 ntBASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 MIR1224-201ENST00000408193 85 ntBASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 ECEL1P3-201ENST00000427961 737 ntBASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEUROD4Q9HD90 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms