Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.93■□□□□ 0.62
COG4Q9H9E3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COG4Q9H9E3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COG4Q9H9E3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.92■□□□□ 0.62
COG4Q9H9E3 AL596275.1-201ENST00000423464 877 ntBASIC18.92■□□□□ 0.62
COG4Q9H9E3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 NUDT16P1-203ENST00000513809 620 ntBASIC18.92■□□□□ 0.62
COG4Q9H9E3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.92■□□□□ 0.62
COG4Q9H9E3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.92■□□□□ 0.62
COG4Q9H9E3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.92■□□□□ 0.62
COG4Q9H9E3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.92■□□□□ 0.62
COG4Q9H9E3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.92■□□□□ 0.62
COG4Q9H9E3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COG4Q9H9E3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 SDHAP1-207ENST00000440850 2000 ntBASIC18.91■□□□□ 0.62
COG4Q9H9E3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 AL355355.2-201ENST00000442321 338 ntBASIC18.91■□□□□ 0.62
COG4Q9H9E3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 MIR4785-201ENST00000585005 73 ntBASIC18.91■□□□□ 0.62
COG4Q9H9E3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COG4Q9H9E3 AL031598.1-201ENST00000561511 1773 ntBASIC18.91■□□□□ 0.62
COG4Q9H9E3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COG4Q9H9E3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 AC135050.7-201ENST00000624508 2218 ntBASIC18.9■□□□□ 0.62
COG4Q9H9E3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 WIZP1-201ENST00000531444 2299 ntBASIC18.9■□□□□ 0.62
COG4Q9H9E3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 AL390961.4-201ENST00000623958 2535 ntBASIC18.9■□□□□ 0.62
COG4Q9H9E3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COG4Q9H9E3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.9■□□□□ 0.62
COG4Q9H9E3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms