Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 DGCR10-201ENST00000609839 495 ntBASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 AC005082.1-201ENST00000413042 2259 ntBASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.08■□□□□ 0.65
LRRC40Q9H9A6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 AC113410.3-201ENST00000623366 203 ntBASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 AL049637.2-201ENST00000641778 930 ntBASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC40Q9H9A6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 AC096733.2-201ENST00000609937 1394 ntBASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 MTMR9LP-203ENST00000426597 1545 ntBASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LRRC40Q9H9A6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
LRRC40Q9H9A6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms