Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 AC068587.9-201ENST00000641814 219 ntBASIC20.29■□□□□ 0.84
NXF3Q9H4D5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NXF3Q9H4D5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 AC079602.3-201ENST00000623931 403 ntBASIC20.28■□□□□ 0.84
NXF3Q9H4D5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NXF3Q9H4D5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NXF3Q9H4D5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.27■□□□□ 0.83
NXF3Q9H4D5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.27■□□□□ 0.83
NXF3Q9H4D5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 MIR3917-201ENST00000580971 93 ntBASIC20.26■□□□□ 0.83
NXF3Q9H4D5 AC093458.2-201ENST00000623150 629 ntBASIC20.26■□□□□ 0.83
NXF3Q9H4D5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 HOXB1-202ENST00000577092 1414 ntBASIC20.26■□□□□ 0.83
NXF3Q9H4D5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NXF3Q9H4D5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms