Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 AC097488.1-201ENST00000507834 756 ntBASIC16.75■□□□□ 0.27
NELFAQ9H3P2 FITM1-202ENST00000559294 800 ntBASIC16.75■□□□□ 0.27
NELFAQ9H3P2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 AP005242.2-201ENST00000580065 1175 ntBASIC16.75■□□□□ 0.27
NELFAQ9H3P2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NELFAQ9H3P2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 KRT8P9-201ENST00000558927 1449 ntBASIC16.74■□□□□ 0.27
NELFAQ9H3P2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 CKBP1-201ENST00000565489 1086 ntBASIC16.74■□□□□ 0.27
NELFAQ9H3P2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 AC093503.3-201ENST00000624917 2352 ntBASIC16.74■□□□□ 0.27
NELFAQ9H3P2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NELFAQ9H3P2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 AC004408.2-201ENST00000623613 2777 ntBASIC16.73■□□□□ 0.27
NELFAQ9H3P2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 MIR1238-201ENST00000408483 83 ntBASIC16.73■□□□□ 0.27
NELFAQ9H3P2 MFAP1P1-201ENST00000442257 1255 ntBASIC16.73■□□□□ 0.27
NELFAQ9H3P2 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.73■□□□□ 0.27
NELFAQ9H3P2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 SLC25A1P4-201ENST00000567977 778 ntBASIC16.73■□□□□ 0.27
NELFAQ9H3P2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NELFAQ9H3P2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELFAQ9H3P2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms