Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VCX3BQ9H321 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VCX3BQ9H321 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VCX3BQ9H321 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VCX3BQ9H321 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VCX3BQ9H321 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 MIR572-201ENST00000384983 95 ntBASIC17.88■□□□□ 0.45
VCX3BQ9H321 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 KRT18P20-201ENST00000548986 1279 ntBASIC17.88■□□□□ 0.45
VCX3BQ9H321 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 CYP21A1P-202ENST00000354927 1481 ntBASIC17.88■□□□□ 0.45
VCX3BQ9H321 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VCX3BQ9H321 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.88■□□□□ 0.45
VCX3BQ9H321 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 AD000864.1-201ENST00000624076 2295 ntBASIC17.87■□□□□ 0.45
VCX3BQ9H321 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms