Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LHX5Q9H2C1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 KRT8P45-201ENST00000414328 1447 ntBASIC19.79■□□□□ 0.76
LHX5Q9H2C1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 AC128688.1-201ENST00000487626 519 ntBASIC19.79■□□□□ 0.76
LHX5Q9H2C1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 MIR3180-5-201ENST00000583743 153 ntBASIC19.79■□□□□ 0.76
LHX5Q9H2C1 AC145285.6-201ENST00000604632 637 ntBASIC19.79■□□□□ 0.76
LHX5Q9H2C1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 WIZP1-201ENST00000531444 2299 ntBASIC19.79■□□□□ 0.76
LHX5Q9H2C1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 AC120498.9-201ENST00000339021 3867 ntBASIC19.79■□□□□ 0.76
LHX5Q9H2C1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX5Q9H2C1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 AC112777.1-201ENST00000540175 1423 ntBASIC19.78■□□□□ 0.76
LHX5Q9H2C1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 MYC-208ENST00000641036 567 ntBASIC19.78■□□□□ 0.76
LHX5Q9H2C1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LHX5Q9H2C1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 INGX-201ENST00000359239 846 ntBASIC19.77■□□□□ 0.76
LHX5Q9H2C1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.77■□□□□ 0.76
LHX5Q9H2C1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 WWOX-216ENST00000569818 525 ntBASIC19.77■□□□□ 0.76
LHX5Q9H2C1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.77■□□□□ 0.76
LHX5Q9H2C1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.77■□□□□ 0.75
LHX5Q9H2C1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.77■□□□□ 0.75
LHX5Q9H2C1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
LHX5Q9H2C1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms