Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 TSPY15P-201ENST00000457163 923 ntBASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 LINC01023-201ENST00000606054 436 ntBASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 AC113410.3-201ENST00000623366 203 ntBASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 AL135905.2-201ENST00000584934 1404 ntBASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXP3Q9BZS1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.39■□□□□ 0.7
FOXP3Q9BZS1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 PRKY-204ENST00000533551 1019 ntBASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXP3Q9BZS1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 MIR4785-201ENST00000585005 73 ntBASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXP3Q9BZS1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 FAM210CP-201ENST00000445714 574 ntBASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 KRT18P21-201ENST00000515767 1272 ntBASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXP3Q9BZS1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms