Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BPIFA3Q9BQP9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 PRSS44-201ENST00000515154 1146 ntBASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 AL138781.1-201ENST00000566567 1274 ntBASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 LINC00896-202ENST00000609602 2128 ntBASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BPIFA3Q9BQP9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BPIFA3Q9BQP9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 AC134043.2-201ENST00000624206 2238 ntBASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.77■□□□□ 0.92
BPIFA3Q9BQP9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
BPIFA3Q9BQP9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms