Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF2Q99805 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
TM9SF2Q99805 AC133561.5-201ENST00000635547 218 ntBASIC17.42■□□□□ 0.38
TM9SF2Q99805 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF2Q99805 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.42■□□□□ 0.38
TM9SF2Q99805 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF2Q99805 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF2Q99805 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF2Q99805 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF2Q99805 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.42■□□□□ 0.38
TM9SF2Q99805 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TM9SF2Q99805 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF2Q99805 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.42■□□□□ 0.38
TM9SF2Q99805 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 FSCN1P1-201ENST00000568912 1481 ntBASIC17.41■□□□□ 0.38
TM9SF2Q99805 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.41■□□□□ 0.38
TM9SF2Q99805 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF2Q99805 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TM9SF2Q99805 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF2Q99805 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF2Q99805 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF2Q99805 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF2Q99805 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TM9SF2Q99805 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.39■□□□□ 0.38
TM9SF2Q99805 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF2Q99805 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF2Q99805 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF2Q99805 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF2Q99805 AL161938.1-201ENST00000569833 2180 ntBASIC17.39■□□□□ 0.37
TM9SF2Q99805 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TM9SF2Q99805 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF2Q99805 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF2Q99805 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TM9SF2Q99805 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms