Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC6Q99741 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDC6Q99741 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC6Q99741 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC6Q99741 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC6Q99741 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC6Q99741 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC6Q99741 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC6Q99741 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC6Q99741 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CDC6Q99741 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.13■□□□□ 0.49
CDC6Q99741 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC6Q99741 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC6Q99741 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC6Q99741 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC6Q99741 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.12■□□□□ 0.49
CDC6Q99741 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.12■□□□□ 0.49
CDC6Q99741 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 KRT18P23-201ENST00000435622 1283 ntBASIC18.12■□□□□ 0.49
CDC6Q99741 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.12■□□□□ 0.49
CDC6Q99741 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDC6Q99741 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.12■□□□□ 0.49
CDC6Q99741 AC005332.3-201ENST00000589904 676 ntBASIC18.12■□□□□ 0.49
CDC6Q99741 BX640515.1-201ENST00000617215 977 ntBASIC18.12■□□□□ 0.49
CDC6Q99741 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC6Q99741 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDC6Q99741 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.12■□□□□ 0.49
CDC6Q99741 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC6Q99741 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDC6Q99741 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDC6Q99741 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDC6Q99741 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDC6Q99741 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 AC104390.1-201ENST00000555663 520 ntBASIC18.11■□□□□ 0.49
CDC6Q99741 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.11■□□□□ 0.49
CDC6Q99741 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.11■□□□□ 0.49
CDC6Q99741 AC099336.1-202ENST00000602961 463 ntBASIC18.11■□□□□ 0.49
CDC6Q99741 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDC6Q99741 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.11■□□□□ 0.49
CDC6Q99741 AC233702.3-201ENST00000578656 1387 ntBASIC18.11■□□□□ 0.49
CDC6Q99741 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.11■□□□□ 0.49
CDC6Q99741 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDC6Q99741 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC6Q99741 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.11■□□□□ 0.49
CDC6Q99741 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.11■□□□□ 0.49
CDC6Q99741 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDC6Q99741 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC6Q99741 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.1■□□□□ 0.49
CDC6Q99741 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.1■□□□□ 0.49
CDC6Q99741 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.1■□□□□ 0.49
CDC6Q99741 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC6Q99741 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.1■□□□□ 0.49
CDC6Q99741 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC6Q99741 KRT16P4-201ENST00000453883 522 ntBASIC18.1■□□□□ 0.49
CDC6Q99741 VENTXP7-201ENST00000475503 772 ntBASIC18.1■□□□□ 0.49
CDC6Q99741 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.1■□□□□ 0.49
CDC6Q99741 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.1■□□□□ 0.49
CDC6Q99741 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.1■□□□□ 0.49
CDC6Q99741 AL390719.2-201ENST00000606993 987 ntBASIC18.1■□□□□ 0.49
CDC6Q99741 AC010240.3-201ENST00000607688 395 ntBASIC18.1■□□□□ 0.49
CDC6Q99741 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC6Q99741 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.1■□□□□ 0.49
CDC6Q99741 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDC6Q99741 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC6Q99741 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC6Q99741 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDC6Q99741 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC6Q99741 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.09■□□□□ 0.49
CDC6Q99741 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC6Q99741 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.09■□□□□ 0.49
CDC6Q99741 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.09■□□□□ 0.49
CDC6Q99741 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC6Q99741 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC6Q99741 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms