Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13□□□□□ -0.33
LYSTQ99698 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LYSTQ99698 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LYSTQ99698 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSTQ99698 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.99□□□□□ -0.33
LYSTQ99698 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSTQ99698 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
LYSTQ99698 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.99□□□□□ -0.33
LYSTQ99698 TP73-AS1-207ENST00000624167 988 ntBASIC12.99□□□□□ -0.33
LYSTQ99698 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LYSTQ99698 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSTQ99698 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSTQ99698 AC009065.1-201ENST00000564055 1225 ntBASIC12.99□□□□□ -0.33
LYSTQ99698 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.99□□□□□ -0.33
LYSTQ99698 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LYSTQ99698 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSTQ99698 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
LYSTQ99698 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSTQ99698 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.99□□□□□ -0.33
LYSTQ99698 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSTQ99698 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.99□□□□□ -0.33
LYSTQ99698 MIR3917-201ENST00000580971 93 ntBASIC12.99□□□□□ -0.33
LYSTQ99698 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSTQ99698 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.98□□□□□ -0.33
LYSTQ99698 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.98□□□□□ -0.33
LYSTQ99698 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
LYSTQ99698 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.98□□□□□ -0.33
LYSTQ99698 Z69720.1-201ENST00000601483 472 ntBASIC12.98□□□□□ -0.33
LYSTQ99698 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSTQ99698 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
LYSTQ99698 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSTQ99698 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
LYSTQ99698 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSTQ99698 RFPL4AP1-201ENST00000530883 850 ntBASIC12.98□□□□□ -0.33
LYSTQ99698 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSTQ99698 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSTQ99698 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSTQ99698 AC134684.3-201ENST00000641758 218 ntBASIC12.98□□□□□ -0.33
LYSTQ99698 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSTQ99698 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSTQ99698 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.98□□□□□ -0.33
LYSTQ99698 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.98□□□□□ -0.33
LYSTQ99698 AC027601.4-201ENST00000611259 610 ntBASIC12.98□□□□□ -0.33
LYSTQ99698 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 NSUN5P1-202ENST00000421140 1535 ntBASIC12.98□□□□□ -0.33
LYSTQ99698 NSUN5P2-203ENST00000457352 1529 ntBASIC12.98□□□□□ -0.33
LYSTQ99698 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LYSTQ99698 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LYSTQ99698 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSTQ99698 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LYSTQ99698 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSTQ99698 AC034105.1-201ENST00000563488 319 ntBASIC12.97□□□□□ -0.33
LYSTQ99698 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSTQ99698 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
LYSTQ99698 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LYSTQ99698 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSTQ99698 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSTQ99698 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSTQ99698 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms