Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.24■■□□□ 1.15
NEK1Q96PY6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
NEK1Q96PY6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.24■■□□□ 1.15
NEK1Q96PY6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK1Q96PY6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK1Q96PY6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK1Q96PY6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK1Q96PY6 AL357033.4-201ENST00000617703 1807 ntBASIC22.24■■□□□ 1.15
NEK1Q96PY6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NEK1Q96PY6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.24■■□□□ 1.15
NEK1Q96PY6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 AC104581.1-202ENST00000635932 2618 ntBASIC22.23■■□□□ 1.15
NEK1Q96PY6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 AL390955.1-201ENST00000428694 934 ntBASIC22.23■■□□□ 1.15
NEK1Q96PY6 TSPY15P-201ENST00000457163 923 ntBASIC22.23■■□□□ 1.15
NEK1Q96PY6 FITM1-202ENST00000559294 800 ntBASIC22.23■■□□□ 1.15
NEK1Q96PY6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK1Q96PY6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.23■■□□□ 1.15
NEK1Q96PY6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 AL109659.2-201ENST00000606809 1674 ntBASIC22.22■■□□□ 1.15
NEK1Q96PY6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK1Q96PY6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NEK1Q96PY6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 AC008556.1-201ENST00000610908 2040 ntBASIC22.21■■□□□ 1.15
NEK1Q96PY6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 GPAT2P1-201ENST00000444924 1672 ntBASIC22.21■■□□□ 1.15
NEK1Q96PY6 AL499627.1-201ENST00000569373 2188 ntBASIC22.21■■□□□ 1.15
NEK1Q96PY6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 AC005082.1-201ENST00000413042 2259 ntBASIC22.21■■□□□ 1.15
NEK1Q96PY6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 AL023284.2-201ENST00000405850 579 ntBASIC22.21■■□□□ 1.15
NEK1Q96PY6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 AC009113.1-201ENST00000570267 2443 ntBASIC22.21■■□□□ 1.15
NEK1Q96PY6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NEK1Q96PY6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK1Q96PY6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
NEK1Q96PY6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.15
NEK1Q96PY6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NEK1Q96PY6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NEK1Q96PY6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NEK1Q96PY6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.2■■□□□ 1.14
NEK1Q96PY6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NEK1Q96PY6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms