Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 AL512625.2-201ENST00000417533 625 ntBASIC14.35□□□□□ -0.11
LINC00479Q96M42 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 YBX1P10-201ENST00000444752 975 ntBASIC14.35□□□□□ -0.11
LINC00479Q96M42 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 AC006557.6-201ENST00000623071 864 ntBASIC14.35□□□□□ -0.11
LINC00479Q96M42 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00479Q96M42 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00479Q96M42 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.34□□□□□ -0.11
LINC00479Q96M42 RPS2P52-201ENST00000469610 820 ntBASIC14.34□□□□□ -0.11
LINC00479Q96M42 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 AC231657.2-201ENST00000624556 255 ntBASIC14.34□□□□□ -0.11
LINC00479Q96M42 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00479Q96M42 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00479Q96M42 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00479Q96M42 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00479Q96M42 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00479Q96M42 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.33□□□□□ -0.11
LINC00479Q96M42 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00479Q96M42 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.33□□□□□ -0.12
LINC00479Q96M42 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00479Q96M42 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00479Q96M42 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms