Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 AP005242.2-201ENST00000580065 1175 ntBASIC18.08■□□□□ 0.48
UBE2E3Q969T4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 CRYGFP-201ENST00000418459 633 ntBASIC18.07■□□□□ 0.48
UBE2E3Q969T4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2E3Q969T4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 ANO7L1-203ENST00000602586 1720 ntBASIC18.06■□□□□ 0.48
UBE2E3Q969T4 AL020996.1-203ENST00000536896 2307 ntBASIC18.06■□□□□ 0.48
UBE2E3Q969T4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 MYC-208ENST00000641036 567 ntBASIC18.06■□□□□ 0.48
UBE2E3Q969T4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2E3Q969T4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 TSPY7P-201ENST00000431358 1114 ntBASIC18.05■□□□□ 0.48
UBE2E3Q969T4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2E3Q969T4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 RCC2P3-201ENST00000418112 1537 ntBASIC18.04■□□□□ 0.48
UBE2E3Q969T4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBE2E3Q969T4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2E3Q969T4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2E3Q969T4 AL109659.2-201ENST00000606809 1674 ntBASIC18.03■□□□□ 0.48
UBE2E3Q969T4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms