Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6NLQ92738 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
USP6NLQ92738 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.25■□□□□ 0.99
USP6NLQ92738 AL512353.2-201ENST00000448759 1962 ntBASIC21.25■□□□□ 0.99
USP6NLQ92738 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.25■□□□□ 0.99
USP6NLQ92738 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.25■□□□□ 0.99
USP6NLQ92738 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
USP6NLQ92738 AP003733.1-201ENST00000491725 852 ntBASIC21.25■□□□□ 0.99
USP6NLQ92738 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.25■□□□□ 0.99
USP6NLQ92738 AC074051.2-201ENST00000565115 352 ntBASIC21.25■□□□□ 0.99
USP6NLQ92738 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.25■□□□□ 0.99
USP6NLQ92738 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.25■□□□□ 0.99
USP6NLQ92738 AL671883.3-201ENST00000603274 991 ntBASIC21.25■□□□□ 0.99
USP6NLQ92738 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 AL353801.3-201ENST00000609898 542 ntBASIC21.25■□□□□ 0.99
USP6NLQ92738 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP6NLQ92738 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.25■□□□□ 0.99
USP6NLQ92738 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP6NLQ92738 RCC2P3-201ENST00000418112 1537 ntBASIC21.24■□□□□ 0.99
USP6NLQ92738 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
USP6NLQ92738 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.24■□□□□ 0.99
USP6NLQ92738 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.24■□□□□ 0.99
USP6NLQ92738 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.24■□□□□ 0.99
USP6NLQ92738 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.24■□□□□ 0.99
USP6NLQ92738 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
USP6NLQ92738 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP6NLQ92738 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.24■□□□□ 0.99
USP6NLQ92738 HLA-A-201ENST00000376802 1334 ntBASIC21.24■□□□□ 0.99
USP6NLQ92738 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP6NLQ92738 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP6NLQ92738 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6NLQ92738 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6NLQ92738 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6NLQ92738 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.23■□□□□ 0.99
USP6NLQ92738 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6NLQ92738 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.23■□□□□ 0.99
USP6NLQ92738 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6NLQ92738 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 AKR1C7P-201ENST00000305623 895 ntBASIC21.23■□□□□ 0.99
USP6NLQ92738 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.23■□□□□ 0.99
USP6NLQ92738 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6NLQ92738 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 AC138894.3-201ENST00000603787 634 ntBASIC21.23■□□□□ 0.99
USP6NLQ92738 IGHV3-41-201ENST00000613121 348 ntBASIC21.23■□□□□ 0.99
USP6NLQ92738 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
USP6NLQ92738 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.23■□□□□ 0.99
USP6NLQ92738 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.23■□□□□ 0.99
USP6NLQ92738 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP6NLQ92738 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.22■□□□□ 0.99
USP6NLQ92738 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.22■□□□□ 0.99
USP6NLQ92738 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 MIR564-202ENST00000385049 94 ntBASIC21.22■□□□□ 0.99
USP6NLQ92738 RN7SL606P-201ENST00000472779 293 ntBASIC21.22■□□□□ 0.99
USP6NLQ92738 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.22■□□□□ 0.99
USP6NLQ92738 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.22■□□□□ 0.99
USP6NLQ92738 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.22■□□□□ 0.99
USP6NLQ92738 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6NLQ92738 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP6NLQ92738 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.22■□□□□ 0.99
USP6NLQ92738 LINC00167-201ENST00000530583 1419 ntBASIC21.21■□□□□ 0.99
USP6NLQ92738 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP6NLQ92738 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms