Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 AL354751.1-201ENST00000412768 1863 ntBASIC14.84□□□□□ -0.03
NPIPB3Q92617 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 AC142086.2-201ENST00000569753 217 ntBASIC14.84□□□□□ -0.03
NPIPB3Q92617 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB3Q92617 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NPIPB3Q92617 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.83□□□□□ -0.03
NPIPB3Q92617 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
NPIPB3Q92617 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPB3Q92617 AC005332.8-201ENST00000622750 2735 ntBASIC14.83□□□□□ -0.04
NPIPB3Q92617 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 UNC93B5-201ENST00000530315 699 ntBASIC14.83□□□□□ -0.04
NPIPB3Q92617 AC104771.1-201ENST00000603335 964 ntBASIC14.83□□□□□ -0.04
NPIPB3Q92617 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB3Q92617 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB3Q92617 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms