Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 KRT18P6-201ENST00000555540 1265 ntBASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 AL445675.2-201ENST00000620291 557 ntBASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATG4AQ8WYN0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATG4AQ8WYN0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 AC004980.1-204ENST00000429707 299 ntBASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 AC068587.9-201ENST00000641814 219 ntBASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATG4AQ8WYN0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.46■□□□□ 0.71
ATG4AQ8WYN0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATG4AQ8WYN0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATG4AQ8WYN0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATG4AQ8WYN0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATG4AQ8WYN0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATG4AQ8WYN0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATG4AQ8WYN0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms