Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 KRT8P10-201ENST00000450021 1447 ntBASIC14.6□□□□□ -0.07
LINC01006Q8NI28 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 PVRIG2P-201ENST00000435460 978 ntBASIC14.6□□□□□ -0.07
LINC01006Q8NI28 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 AC091304.2-201ENST00000564639 760 ntBASIC14.6□□□□□ -0.07
LINC01006Q8NI28 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 AC012615.1-201ENST00000565797 1299 ntBASIC14.6□□□□□ -0.07
LINC01006Q8NI28 AC090616.6-201ENST00000582640 721 ntBASIC14.6□□□□□ -0.07
LINC01006Q8NI28 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 LINC01711-201ENST00000598340 967 ntBASIC14.6□□□□□ -0.07
LINC01006Q8NI28 AL732292.2-201ENST00000609649 430 ntBASIC14.6□□□□□ -0.07
LINC01006Q8NI28 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01006Q8NI28 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 AC034236.2-201ENST00000606662 1610 ntBASIC14.59□□□□□ -0.07
LINC01006Q8NI28 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 EMBP1-201ENST00000458200 901 ntBASIC14.59□□□□□ -0.07
LINC01006Q8NI28 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01006Q8NI28 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01006Q8NI28 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01006Q8NI28 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC01006Q8NI28 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01006Q8NI28 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01006Q8NI28 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01006Q8NI28 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.58□□□□□ -0.08
LINC01006Q8NI28 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 AC104819.1-201ENST00000504587 486 ntBASIC14.58□□□□□ -0.08
LINC01006Q8NI28 FOSL1P1-201ENST00000511041 816 ntBASIC14.58□□□□□ -0.08
LINC01006Q8NI28 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 MIR3180-4-201ENST00000582223 153 ntBASIC14.58□□□□□ -0.08
LINC01006Q8NI28 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 IGHV3-41-201ENST00000613121 348 ntBASIC14.58□□□□□ -0.08
LINC01006Q8NI28 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 LINC01521-201ENST00000504184 1943 ntBASIC14.58□□□□□ -0.08
LINC01006Q8NI28 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms