Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 AC067852.2-201ENST00000590513 2313 ntBASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 TCAF2P1-201ENST00000291129 2421 ntBASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 AC009113.1-201ENST00000570267 2443 ntBASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 THA1P-201ENST00000590384 1145 ntBASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SPTSSBQ8NFR3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 AF131216.4-201ENST00000638924 1588 ntBASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 MKRN4P-201ENST00000444706 1521 ntBASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms