Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AP000347.1-202ENST00000435868 847 ntBASIC5.79□□□□□ -1.48
SYNE1Q8NF91 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AC125437.2-201ENST00000625180 2167 ntBASIC5.79□□□□□ -1.48
SYNE1Q8NF91 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AL441883.1-201ENST00000566170 1045 ntBASIC5.79□□□□□ -1.48
SYNE1Q8NF91 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 DBP-204ENST00000599385 709 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 MOK-225ENST00000522867 1883 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 VENTXP5-201ENST00000523979 775 ntBASIC5.79□□□□□ -1.48
SYNE1Q8NF91 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TBC1D3P2-202ENST00000577902 1649 ntBASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 LINC01238-205ENST00000567549 1107 ntBASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE1Q8NF91 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SYNE1Q8NF91 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SYNE1Q8NF91 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE1Q8NF91 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE1Q8NF91 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms