Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC197Q8NCU1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC197Q8NCU1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC197Q8NCU1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC197Q8NCU1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC197Q8NCU1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC197Q8NCU1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC197Q8NCU1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms