Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 AC117947.1-201ENST00000427448 529 ntBASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 AC139887.4-201ENST00000607877 719 ntBASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 Z98044.1-201ENST00000632503 1764 ntBASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01555Q8NAE3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 NEK4P2-201ENST00000580004 1012 ntBASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 AL023973.1-201ENST00000624619 620 ntBASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01555Q8NAE3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 AC093525.10-201ENST00000625130 1569 ntBASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 COX11P1-201ENST00000489116 835 ntBASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 TNXA-203ENST00000507684 2038 ntBASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC01555Q8NAE3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 YBX1P2-201ENST00000489612 999 ntBASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 AC011558.1-201ENST00000623459 338 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms