Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 AC018445.3-201ENST00000624177 1945 ntBASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 TMPOP1-202ENST00000424642 1267 ntBASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 AL357033.4-201ENST00000617703 1807 ntBASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAM1L1Q8N609 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 COX11P1-201ENST00000489116 835 ntBASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAM1L1Q8N609 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 AP000974.1-201ENST00000623909 2387 ntBASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 AC034236.2-201ENST00000606662 1610 ntBASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAM1L1Q8N609 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 Z98044.1-201ENST00000632503 1764 ntBASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms