Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 AC034236.2-201ENST00000606662 1610 ntBASIC19.96■□□□□ 0.79
TTC39CQ8N584 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 NEK4P2-201ENST00000580004 1012 ntBASIC19.96■□□□□ 0.79
TTC39CQ8N584 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39CQ8N584 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
TTC39CQ8N584 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39CQ8N584 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39CQ8N584 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39CQ8N584 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39CQ8N584 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39CQ8N584 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 AP000593.1-201ENST00000393668 712 ntBASIC19.95■□□□□ 0.78
TTC39CQ8N584 AC113347.1-201ENST00000413321 391 ntBASIC19.95■□□□□ 0.78
TTC39CQ8N584 LIN28AP1-201ENST00000429574 405 ntBASIC19.95■□□□□ 0.78
TTC39CQ8N584 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 AL031598.1-201ENST00000561511 1773 ntBASIC19.95■□□□□ 0.78
TTC39CQ8N584 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39CQ8N584 AL357033.4-201ENST00000617703 1807 ntBASIC19.95■□□□□ 0.78
TTC39CQ8N584 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TTC39CQ8N584 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39CQ8N584 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 HOXB1-202ENST00000577092 1414 ntBASIC19.94■□□□□ 0.78
TTC39CQ8N584 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 AC120498.9-201ENST00000339021 3867 ntBASIC19.94■□□□□ 0.78
TTC39CQ8N584 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 ECEL1P3-201ENST00000427961 737 ntBASIC19.94■□□□□ 0.78
TTC39CQ8N584 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TTC39CQ8N584 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 CROCCP3-202ENST00000420820 1947 ntBASIC19.94■□□□□ 0.78
TTC39CQ8N584 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TTC39CQ8N584 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 AC112777.1-201ENST00000540175 1423 ntBASIC19.93■□□□□ 0.78
TTC39CQ8N584 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 AC036111.1-201ENST00000533973 1582 ntBASIC19.93■□□□□ 0.78
TTC39CQ8N584 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TTC39CQ8N584 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 TNXA-203ENST00000507684 2038 ntBASIC19.93■□□□□ 0.78
TTC39CQ8N584 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.93■□□□□ 0.78
TTC39CQ8N584 KRT8P45-201ENST00000414328 1447 ntBASIC19.93■□□□□ 0.78
TTC39CQ8N584 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TTC39CQ8N584 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
TTC39CQ8N584 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TTC39CQ8N584 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TTC39CQ8N584 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TTC39CQ8N584 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms