Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHPFQ8IZ52 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 HBZP1-201ENST00000354915 429 ntBASIC19.1■□□□□ 0.65
CHPFQ8IZ52 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.1■□□□□ 0.65
CHPFQ8IZ52 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 KRT126P-201ENST00000549467 1181 ntBASIC19.1■□□□□ 0.65
CHPFQ8IZ52 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHPFQ8IZ52 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 AC092597.1-201ENST00000487352 616 ntBASIC19.09■□□□□ 0.65
CHPFQ8IZ52 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 TREX1-205ENST00000625293 1783 ntBASIC19.09■□□□□ 0.65
CHPFQ8IZ52 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHPFQ8IZ52 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHPFQ8IZ52 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 AL645929.1-201ENST00000420084 975 ntBASIC19.08■□□□□ 0.64
CHPFQ8IZ52 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms