Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 AL109659.2-201ENST00000606809 1674 ntBASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCUBE3Q8IX30 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 MCCD1P1-208ENST00000445732 328 ntBASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.73■□□□□ 0.75
SCUBE3Q8IX30 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 MTMR9LP-203ENST00000426597 1545 ntBASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 AL357033.4-201ENST00000617703 1807 ntBASIC19.72■□□□□ 0.75
SCUBE3Q8IX30 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 KRT8P45-201ENST00000414328 1447 ntBASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.71■□□□□ 0.75
SCUBE3Q8IX30 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms