Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 TSPY23P-201ENST00000440136 739 ntBASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
CCDC50Q8IVM0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC50Q8IVM0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC50Q8IVM0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC50Q8IVM0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 KRT18P6-201ENST00000555540 1265 ntBASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 AC083906.6-201ENST00000641366 219 ntBASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 AC090164.3-201ENST00000610780 2143 ntBASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC50Q8IVM0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC50Q8IVM0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms