Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 HLA-G-202ENST00000376815 851 ntBASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 HLA-G-203ENST00000376818 1127 ntBASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 AL136116.3-201ENST00000402907 1138 ntBASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 AP001160.3-201ENST00000601484 763 ntBASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 AC022211.2-201ENST00000585075 2527 ntBASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CROCCP3Q8IVE0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CROCCP3Q8IVE0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms